Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Rpp38Q80UU2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rpp38Q80UU2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rpp38Q80UU2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpp38Q80UU2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.3■■□□□ 1
Rpp38Q80UU2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rpp38Q80UU2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpp38Q80UU2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rpp38Q80UU2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.29■■□□□ 1
Rpp38Q80UU2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpp38Q80UU2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rpp38Q80UU2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpp38Q80UU2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.28■■□□□ 1
Rpp38Q80UU2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.28■■□□□ 1
Rpp38Q80UU2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpp38Q80UU2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rpp38Q80UU2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.28■■□□□ 1
Rpp38Q80UU2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rpp38Q80UU2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rpp38Q80UU2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rpp38Q80UU2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rpp38Q80UU2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.26■□□□□ 0.99
Rpp38Q80UU2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rpp38Q80UU2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Rpp38Q80UU2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp38Q80UU2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.23■□□□□ 0.99
Rpp38Q80UU2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp38Q80UU2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp38Q80UU2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.2■□□□□ 0.99
Rpp38Q80UU2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp38Q80UU2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp38Q80UU2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp38Q80UU2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp38Q80UU2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rpp38Q80UU2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp38Q80UU2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rpp38Q80UU2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rpp38Q80UU2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp38Q80UU2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp38Q80UU2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms