Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh19Q80TF3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh19Q80TF3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh19Q80TF3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh19Q80TF3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdh19Q80TF3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh19Q80TF3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh19Q80TF3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdh19Q80TF3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh19Q80TF3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh19Q80TF3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdh19Q80TF3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh19Q80TF3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh19Q80TF3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh19Q80TF3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdh19Q80TF3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh19Q80TF3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh19Q80TF3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh19Q80TF3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh19Q80TF3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh19Q80TF3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh19Q80TF3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh19Q80TF3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh19Q80TF3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh19Q80TF3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh19Q80TF3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh19Q80TF3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh19Q80TF3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh19Q80TF3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh19Q80TF3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdh19Q80TF3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh19Q80TF3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Pcdh19Q80TF3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh19Q80TF3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms