Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.49■□□□□ 0.71
Pif1Q80SX8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pif1Q80SX8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.49■□□□□ 0.71
Pif1Q80SX8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pif1Q80SX8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pif1Q80SX8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pif1Q80SX8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pif1Q80SX8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pif1Q80SX8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pif1Q80SX8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pif1Q80SX8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pif1Q80SX8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pif1Q80SX8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pif1Q80SX8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pif1Q80SX8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pif1Q80SX8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pif1Q80SX8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.46■□□□□ 0.71
Pif1Q80SX8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pif1Q80SX8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.45■□□□□ 0.7
Pif1Q80SX8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.45■□□□□ 0.7
Pif1Q80SX8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pif1Q80SX8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.45■□□□□ 0.7
Pif1Q80SX8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pif1Q80SX8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pif1Q80SX8 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.45■□□□□ 0.7
Pif1Q80SX8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.45■□□□□ 0.7
Pif1Q80SX8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pif1Q80SX8 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.44■□□□□ 0.7
Pif1Q80SX8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pif1Q80SX8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pif1Q80SX8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pif1Q80SX8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.41■□□□□ 0.7
Pif1Q80SX8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pif1Q80SX8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pif1Q80SX8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pif1Q80SX8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.39■□□□□ 0.7
Pif1Q80SX8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Golgb1-201ENSMUST00000023534 498 ntBASIC19.39■□□□□ 0.69
Pif1Q80SX8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms