Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vma21Q78T54 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vma21Q78T54 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.19■□□□□ 0.34
Vma21Q78T54 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vma21Q78T54 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vma21Q78T54 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vma21Q78T54 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vma21Q78T54 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vma21Q78T54 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vma21Q78T54 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vma21Q78T54 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.17■□□□□ 0.34
Vma21Q78T54 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.17■□□□□ 0.34
Vma21Q78T54 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vma21Q78T54 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vma21Q78T54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Vma21Q78T54 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.16■□□□□ 0.34
Vma21Q78T54 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vma21Q78T54 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vma21Q78T54 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vma21Q78T54 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
Vma21Q78T54 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vma21Q78T54 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vma21Q78T54 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vma21Q78T54 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vma21Q78T54 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vma21Q78T54 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vma21Q78T54 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vma21Q78T54 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vma21Q78T54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vma21Q78T54 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vma21Q78T54 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vma21Q78T54 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vma21Q78T54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vma21Q78T54 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Vma21Q78T54 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vma21Q78T54 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vma21Q78T54 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.12■□□□□ 0.33
Vma21Q78T54 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vma21Q78T54 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vma21Q78T54 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vma21Q78T54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vma21Q78T54 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.11■□□□□ 0.33
Vma21Q78T54 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vma21Q78T54 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vma21Q78T54 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Vma21Q78T54 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vma21Q78T54 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vma21Q78T54 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vma21Q78T54 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.09■□□□□ 0.33
Vma21Q78T54 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vma21Q78T54 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vma21Q78T54 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vma21Q78T54 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Vma21Q78T54 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vma21Q78T54 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms