Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn10aQ6QIY3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Scn10aQ6QIY3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.74■■□□□ 1.55
Scn10aQ6QIY3 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.74■■□□□ 1.55
Scn10aQ6QIY3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.73■■□□□ 1.55
Scn10aQ6QIY3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scn10aQ6QIY3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scn10aQ6QIY3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Scn10aQ6QIY3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.7■■□□□ 1.55
Scn10aQ6QIY3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Scn10aQ6QIY3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
Scn10aQ6QIY3 Gm43017-201ENSMUST00000198296 752 ntBASIC24.7■■□□□ 1.54
Scn10aQ6QIY3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.7■■□□□ 1.54
Scn10aQ6QIY3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.7■■□□□ 1.54
Scn10aQ6QIY3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scn10aQ6QIY3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Gm43137-201ENSMUST00000198052 594 ntBASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scn10aQ6QIY3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.68■■□□□ 1.54
Scn10aQ6QIY3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Scn10aQ6QIY3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
Scn10aQ6QIY3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scn10aQ6QIY3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scn10aQ6QIY3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.67■■□□□ 1.54
Scn10aQ6QIY3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn10aQ6QIY3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn10aQ6QIY3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn10aQ6QIY3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn10aQ6QIY3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scn10aQ6QIY3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.65■■□□□ 1.54
Scn10aQ6QIY3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Scn10aQ6QIY3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.64■■□□□ 1.54
Scn10aQ6QIY3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Scn10aQ6QIY3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Scn10aQ6QIY3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Scn10aQ6QIY3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Scn10aQ6QIY3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Scn10aQ6QIY3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Gm12251-201ENSMUST00000117893 792 ntBASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.62■■□□□ 1.53
Scn10aQ6QIY3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms