Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.2■□□□□ 0.5
Rif1Q6PR54 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rif1Q6PR54 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rif1Q6PR54 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rif1Q6PR54 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rif1Q6PR54 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rif1Q6PR54 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.19■□□□□ 0.5
Rif1Q6PR54 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.19■□□□□ 0.5
Rif1Q6PR54 Gm7143-201ENSMUST00000222811 859 ntBASIC18.19■□□□□ 0.5
Rif1Q6PR54 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rif1Q6PR54 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.18■□□□□ 0.5
Rif1Q6PR54 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rif1Q6PR54 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rif1Q6PR54 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.18■□□□□ 0.5
Rif1Q6PR54 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rif1Q6PR54 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rif1Q6PR54 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rif1Q6PR54 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.17■□□□□ 0.5
Rif1Q6PR54 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rif1Q6PR54 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rif1Q6PR54 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.16■□□□□ 0.5
Rif1Q6PR54 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rif1Q6PR54 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rif1Q6PR54 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Rif1Q6PR54 Zxda-201ENSMUST00000117281 2621 ntBASIC18.16■□□□□ 0.5
Rif1Q6PR54 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Rif1Q6PR54 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rif1Q6PR54 Gm43060-201ENSMUST00000200621 289 ntBASIC18.14■□□□□ 0.5
Rif1Q6PR54 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rif1Q6PR54 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.14■□□□□ 0.49
Rif1Q6PR54 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rif1Q6PR54 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rif1Q6PR54 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.14■□□□□ 0.49
Rif1Q6PR54 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.14■□□□□ 0.49
Rif1Q6PR54 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rif1Q6PR54 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.13■□□□□ 0.49
Rif1Q6PR54 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rif1Q6PR54 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rif1Q6PR54 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rif1Q6PR54 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.12■□□□□ 0.49
Rif1Q6PR54 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.12■□□□□ 0.49
Rif1Q6PR54 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rif1Q6PR54 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rif1Q6PR54 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.12■□□□□ 0.49
Rif1Q6PR54 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.11■□□□□ 0.49
Rif1Q6PR54 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rif1Q6PR54 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rif1Q6PR54 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rif1Q6PR54 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rif1Q6PR54 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Rif1Q6PR54 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rif1Q6PR54 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rif1Q6PR54 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rif1Q6PR54 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.08■□□□□ 0.49
Rif1Q6PR54 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rif1Q6PR54 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.08■□□□□ 0.49
Rif1Q6PR54 Gm12251-201ENSMUST00000117893 792 ntBASIC18.08■□□□□ 0.48
Rif1Q6PR54 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rif1Q6PR54 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rif1Q6PR54 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rif1Q6PR54 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rif1Q6PR54 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms