Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube1Q6NZL8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube1Q6NZL8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scube1Q6NZL8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube1Q6NZL8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube1Q6NZL8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scube1Q6NZL8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.2■□□□□ 0.82
Scube1Q6NZL8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.2■□□□□ 0.82
Scube1Q6NZL8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scube1Q6NZL8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scube1Q6NZL8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube1Q6NZL8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
Scube1Q6NZL8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube1Q6NZL8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scube1Q6NZL8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube1Q6NZL8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube1Q6NZL8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube1Q6NZL8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube1Q6NZL8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube1Q6NZL8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scube1Q6NZL8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube1Q6NZL8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube1Q6NZL8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scube1Q6NZL8 Scarna2-201ENSMUST00000157560 414 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms