Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ParpbpQ6IRT3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ParpbpQ6IRT3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ParpbpQ6IRT3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ParpbpQ6IRT3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ParpbpQ6IRT3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ParpbpQ6IRT3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ParpbpQ6IRT3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ParpbpQ6IRT3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ParpbpQ6IRT3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ParpbpQ6IRT3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.72■□□□□ 0.75
ParpbpQ6IRT3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ParpbpQ6IRT3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ParpbpQ6IRT3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ParpbpQ6IRT3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ParpbpQ6IRT3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ParpbpQ6IRT3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ParpbpQ6IRT3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.74
ParpbpQ6IRT3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Gm45444-201ENSMUST00000211394 898 ntBASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ParpbpQ6IRT3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ParpbpQ6IRT3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms