Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Krt42Q6IFX2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Krt42Q6IFX2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Krt42Q6IFX2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Krt42Q6IFX2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.75■■□□□ 1.07
Krt42Q6IFX2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Krt42Q6IFX2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt42Q6IFX2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt42Q6IFX2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Krt42Q6IFX2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Krt42Q6IFX2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Krt42Q6IFX2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt42Q6IFX2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Krt42Q6IFX2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Krt42Q6IFX2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Krt42Q6IFX2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Krt42Q6IFX2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.7■■□□□ 1.06
Krt42Q6IFX2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Krt42Q6IFX2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Krt42Q6IFX2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Krt42Q6IFX2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Krt42Q6IFX2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.69■■□□□ 1.06
Krt42Q6IFX2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Krt42Q6IFX2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.69■■□□□ 1.06
Krt42Q6IFX2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.69■■□□□ 1.06
Krt42Q6IFX2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Krt42Q6IFX2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Krt42Q6IFX2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Krt42Q6IFX2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Krt42Q6IFX2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Krt42Q6IFX2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Krt42Q6IFX2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Krt42Q6IFX2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt42Q6IFX2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt42Q6IFX2 Gm6821-201ENSMUST00000107540 542 ntBASIC21.63■■□□□ 1.05
Krt42Q6IFX2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.63■■□□□ 1.05
Krt42Q6IFX2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Krt42Q6IFX2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms