Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.68■□□□□ 0.9
Six3Q62233 Gm12366-201ENSMUST00000121722 873 ntBASIC20.68■□□□□ 0.9
Six3Q62233 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.68■□□□□ 0.9
Six3Q62233 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six3Q62233 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six3Q62233 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six3Q62233 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.68■□□□□ 0.9
Six3Q62233 Gm5786-201ENSMUST00000085368 882 ntBASIC20.68■□□□□ 0.9
Six3Q62233 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.68■□□□□ 0.9
Six3Q62233 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six3Q62233 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six3Q62233 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six3Q62233 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Six3Q62233 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Six3Q62233 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six3Q62233 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Six3Q62233 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.65■□□□□ 0.9
Six3Q62233 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six3Q62233 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Six3Q62233 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Six3Q62233 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Six3Q62233 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Six3Q62233 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Six3Q62233 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six3Q62233 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Six3Q62233 Mir6538-201ENSMUST00000183713 110 ntBASIC20.64■□□□□ 0.89
Six3Q62233 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.64■□□□□ 0.89
Six3Q62233 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six3Q62233 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six3Q62233 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.63■□□□□ 0.89
Six3Q62233 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.63■□□□□ 0.89
Six3Q62233 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.63■□□□□ 0.89
Six3Q62233 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six3Q62233 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.62■□□□□ 0.89
Six3Q62233 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six3Q62233 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six3Q62233 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six3Q62233 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six3Q62233 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Six3Q62233 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Six3Q62233 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six3Q62233 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.59■□□□□ 0.89
Six3Q62233 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six3Q62233 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.59■□□□□ 0.89
Six3Q62233 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six3Q62233 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six3Q62233 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Six3Q62233 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Six3Q62233 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Six3Q62233 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Six3Q62233 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Six3Q62233 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.57■□□□□ 0.88
Six3Q62233 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Six3Q62233 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Six3Q62233 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.57■□□□□ 0.88
Six3Q62233 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six3Q62233 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six3Q62233 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.56■□□□□ 0.88
Six3Q62233 Gm10420-201ENSMUST00000121713 882 ntBASIC20.56■□□□□ 0.88
Six3Q62233 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.56■□□□□ 0.88
Six3Q62233 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six3Q62233 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six3Q62233 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms