Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Notch3Q61982 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Notch3Q61982 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.1■□□□□ 0.17
Notch3Q61982 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Notch3Q61982 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Notch3Q61982 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.1■□□□□ 0.17
Notch3Q61982 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.1■□□□□ 0.17
Notch3Q61982 Gm40881-201ENSMUST00000223397 166 ntBASIC16.1■□□□□ 0.17
Notch3Q61982 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.09■□□□□ 0.17
Notch3Q61982 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Notch3Q61982 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Notch3Q61982 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
Notch3Q61982 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.08■□□□□ 0.17
Notch3Q61982 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Notch3Q61982 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.08■□□□□ 0.17
Notch3Q61982 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Notch3Q61982 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Notch3Q61982 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Notch3Q61982 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.08■□□□□ 0.16
Notch3Q61982 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Notch3Q61982 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Notch3Q61982 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Notch3Q61982 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Notch3Q61982 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Notch3Q61982 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.07■□□□□ 0.16
Notch3Q61982 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Notch3Q61982 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.07■□□□□ 0.16
Notch3Q61982 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Notch3Q61982 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Notch3Q61982 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Notch3Q61982 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.06■□□□□ 0.16
Notch3Q61982 Gm27454-201ENSMUST00000185090 204 ntBASIC16.06■□□□□ 0.16
Notch3Q61982 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Notch3Q61982 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.06■□□□□ 0.16
Notch3Q61982 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Notch3Q61982 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Notch3Q61982 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.05■□□□□ 0.16
Notch3Q61982 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Notch3Q61982 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.05■□□□□ 0.16
Notch3Q61982 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Notch3Q61982 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Notch3Q61982 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.04■□□□□ 0.16
Notch3Q61982 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Notch3Q61982 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.03■□□□□ 0.16
Notch3Q61982 Golgb1-201ENSMUST00000023534 498 ntBASIC16.03■□□□□ 0.16
Notch3Q61982 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Notch3Q61982 Gm12821-201ENSMUST00000120022 600 ntBASIC16.03■□□□□ 0.16
Notch3Q61982 Gm10399-202ENSMUST00000202768 748 ntBASIC16.03■□□□□ 0.16
Notch3Q61982 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Notch3Q61982 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Notch3Q61982 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
Notch3Q61982 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Notch3Q61982 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.02■□□□□ 0.16
Notch3Q61982 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Notch3Q61982 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Notch3Q61982 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Notch3Q61982 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.02■□□□□ 0.15
Notch3Q61982 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Notch3Q61982 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Notch3Q61982 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms