Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hes3Q61657 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Hes3Q61657 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.2■□□□□ 0.5
Hes3Q61657 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hes3Q61657 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.18■□□□□ 0.5
Hes3Q61657 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hes3Q61657 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hes3Q61657 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.18■□□□□ 0.5
Hes3Q61657 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hes3Q61657 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.17■□□□□ 0.5
Hes3Q61657 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hes3Q61657 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.17■□□□□ 0.5
Hes3Q61657 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.17■□□□□ 0.5
Hes3Q61657 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hes3Q61657 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hes3Q61657 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hes3Q61657 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hes3Q61657 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hes3Q61657 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hes3Q61657 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Hes3Q61657 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hes3Q61657 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.15■□□□□ 0.5
Hes3Q61657 Gm14523-201ENSMUST00000117260 558 ntBASIC18.15■□□□□ 0.5
Hes3Q61657 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Hes3Q61657 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.15■□□□□ 0.5
Hes3Q61657 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Hes3Q61657 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hes3Q61657 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hes3Q61657 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hes3Q61657 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hes3Q61657 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hes3Q61657 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Gm7332-201ENSMUST00000118351 454 ntBASIC18.13■□□□□ 0.49
Hes3Q61657 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.13■□□□□ 0.49
Hes3Q61657 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hes3Q61657 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hes3Q61657 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hes3Q61657 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hes3Q61657 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hes3Q61657 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hes3Q61657 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.12■□□□□ 0.49
Hes3Q61657 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hes3Q61657 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hes3Q61657 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hes3Q61657 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms