Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Sox17Q61473 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox17Q61473 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox17Q61473 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox17Q61473 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sox17Q61473 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox17Q61473 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox17Q61473 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sox17Q61473 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox17Q61473 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sox17Q61473 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox17Q61473 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox17Q61473 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.8■□□□□ 0.76
Sox17Q61473 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sox17Q61473 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox17Q61473 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sox17Q61473 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox17Q61473 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sox17Q61473 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.8■□□□□ 0.76
Sox17Q61473 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox17Q61473 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox17Q61473 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox17Q61473 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.79■□□□□ 0.76
Sox17Q61473 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.79■□□□□ 0.76
Sox17Q61473 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox17Q61473 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox17Q61473 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sox17Q61473 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.78■□□□□ 0.76
Sox17Q61473 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox17Q61473 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox17Q61473 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox17Q61473 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sox17Q61473 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox17Q61473 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox17Q61473 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox17Q61473 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sox17Q61473 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox17Q61473 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sox17Q61473 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox17Q61473 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sox17Q61473 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox17Q61473 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox17Q61473 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox17Q61473 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.75■□□□□ 0.75
Sox17Q61473 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.75■□□□□ 0.75
Sox17Q61473 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox17Q61473 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox17Q61473 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox17Q61473 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox17Q61473 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sox17Q61473 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sox17Q61473 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox17Q61473 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Sox17Q61473 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox17Q61473 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.73■□□□□ 0.75
Sox17Q61473 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.73■□□□□ 0.75
Sox17Q61473 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.73■□□□□ 0.75
Sox17Q61473 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox17Q61473 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sox17Q61473 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Golph3-202ENSMUST00000226517 2359 ntBASIC19.72■□□□□ 0.75
Sox17Q61473 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox17Q61473 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox17Q61473 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox17Q61473 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.71■□□□□ 0.75
Sox17Q61473 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox17Q61473 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox17Q61473 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sox17Q61473 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sox17Q61473 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms