Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.24■□□□□ 0.83
Xrcc1Q60596 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrcc1Q60596 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.24■□□□□ 0.83
Xrcc1Q60596 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrcc1Q60596 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xrcc1Q60596 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Xrcc1Q60596 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xrcc1Q60596 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.21■□□□□ 0.83
Xrcc1Q60596 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Xrcc1Q60596 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Xrcc1Q60596 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Xrcc1Q60596 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.2■□□□□ 0.82
Xrcc1Q60596 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Xrcc1Q60596 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Xrcc1Q60596 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Xrcc1Q60596 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.19■□□□□ 0.82
Xrcc1Q60596 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Xrcc1Q60596 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Xrcc1Q60596 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.18■□□□□ 0.82
Xrcc1Q60596 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.18■□□□□ 0.82
Xrcc1Q60596 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Xrcc1Q60596 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.17■□□□□ 0.82
Xrcc1Q60596 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.17■□□□□ 0.82
Xrcc1Q60596 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrcc1Q60596 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrcc1Q60596 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.16■□□□□ 0.82
Xrcc1Q60596 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrcc1Q60596 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrcc1Q60596 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.16■□□□□ 0.82
Xrcc1Q60596 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrcc1Q60596 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.15■□□□□ 0.82
Xrcc1Q60596 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrcc1Q60596 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrcc1Q60596 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrcc1Q60596 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.13■□□□□ 0.81
Xrcc1Q60596 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.13■□□□□ 0.81
Xrcc1Q60596 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.13■□□□□ 0.81
Xrcc1Q60596 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrcc1Q60596 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.12■□□□□ 0.81
Xrcc1Q60596 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms