Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.7■□□□□ 0.58
Trav6-2Q5R1I4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-2Q5R1I4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-2Q5R1I4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-2Q5R1I4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-2Q5R1I4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-2Q5R1I4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav6-2Q5R1I4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-2Q5R1I4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-2Q5R1I4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav6-2Q5R1I4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-2Q5R1I4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Gm27454-201ENSMUST00000185090 204 ntBASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-2Q5R1I4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6-2Q5R1I4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-2Q5R1I4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav6-2Q5R1I4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trav6-2Q5R1I4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-2Q5R1I4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Trav6-2Q5R1I4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-2Q5R1I4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-2Q5R1I4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav6-2Q5R1I4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-2Q5R1I4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms