Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6d-4Q5R1I0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6d-4Q5R1I0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-4Q5R1I0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-4Q5R1I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav6d-4Q5R1I0 Gm7417-201ENSMUST00000192950 473 ntBASIC17.82■□□□□ 0.44
Trav6d-4Q5R1I0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-4Q5R1I0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Gm40881-201ENSMUST00000223397 166 ntBASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-4Q5R1I0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-4Q5R1I0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.8■□□□□ 0.44
Trav6d-4Q5R1I0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-4Q5R1I0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-4Q5R1I0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-4Q5R1I0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-4Q5R1I0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6d-4Q5R1I0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6d-4Q5R1I0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6d-4Q5R1I0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6d-4Q5R1I0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav6d-4Q5R1I0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6d-4Q5R1I0 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-4Q5R1I0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-4Q5R1I0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav6d-4Q5R1I0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms