Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Rc3h1Q4VGL6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rc3h1Q4VGL6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rc3h1Q4VGL6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rc3h1Q4VGL6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rc3h1Q4VGL6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rc3h1Q4VGL6 Gm22238-201ENSMUST00000175222 88 ntBASIC24.67■■□□□ 1.54
Rc3h1Q4VGL6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Rc3h1Q4VGL6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Rc3h1Q4VGL6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rc3h1Q4VGL6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rc3h1Q4VGL6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Rc3h1Q4VGL6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.66■■□□□ 1.54
Rc3h1Q4VGL6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rc3h1Q4VGL6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.65■■□□□ 1.54
Rc3h1Q4VGL6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.65■■□□□ 1.54
Rc3h1Q4VGL6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rc3h1Q4VGL6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rc3h1Q4VGL6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rc3h1Q4VGL6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rc3h1Q4VGL6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Rc3h1Q4VGL6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rc3h1Q4VGL6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Rc3h1Q4VGL6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rc3h1Q4VGL6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rc3h1Q4VGL6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.62■■□□□ 1.53
Rc3h1Q4VGL6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Rc3h1Q4VGL6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rc3h1Q4VGL6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rc3h1Q4VGL6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rc3h1Q4VGL6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rc3h1Q4VGL6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Rc3h1Q4VGL6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Rc3h1Q4VGL6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Rc3h1Q4VGL6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rc3h1Q4VGL6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Rc3h1Q4VGL6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Rc3h1Q4VGL6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rc3h1Q4VGL6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rc3h1Q4VGL6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rc3h1Q4VGL6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Rc3h1Q4VGL6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rc3h1Q4VGL6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rc3h1Q4VGL6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Rc3h1Q4VGL6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rc3h1Q4VGL6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms