Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.19□□□□□ -0.3
Herc2Q4U2R1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.19□□□□□ -0.3
Herc2Q4U2R1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Herc2Q4U2R1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.19□□□□□ -0.3
Herc2Q4U2R1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Herc2Q4U2R1 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Gm7199-201ENSMUST00000118327 1485 ntBASIC13.18□□□□□ -0.3
Herc2Q4U2R1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Gm10653-202ENSMUST00000139570 835 ntBASIC13.17□□□□□ -0.3
Herc2Q4U2R1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.17□□□□□ -0.3
Herc2Q4U2R1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Gm12251-201ENSMUST00000117893 792 ntBASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Herc2Q4U2R1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Gm22240-201ENSMUST00000175225 82 ntBASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.15□□□□□ -0.3
Herc2Q4U2R1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 AV356131-201ENSMUST00000206201 750 ntBASIC13.15□□□□□ -0.3
Herc2Q4U2R1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc2Q4U2R1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc2Q4U2R1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Gm18671-201ENSMUST00000214826 683 ntBASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Herc2Q4U2R1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herc2Q4U2R1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc2Q4U2R1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc2Q4U2R1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc2Q4U2R1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms