Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf223Q3UV31 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf223Q3UV31 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf223Q3UV31 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf223Q3UV31 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
Rnf223Q3UV31 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf223Q3UV31 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf223Q3UV31 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rnf223Q3UV31 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf223Q3UV31 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf223Q3UV31 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rnf223Q3UV31 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Gm22238-201ENSMUST00000175222 88 ntBASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf223Q3UV31 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.63■□□□□ 0.89
Rnf223Q3UV31 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf223Q3UV31 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf223Q3UV31 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf223Q3UV31 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf223Q3UV31 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf223Q3UV31 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf223Q3UV31 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf223Q3UV31 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf223Q3UV31 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.59■□□□□ 0.89
Rnf223Q3UV31 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf223Q3UV31 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf223Q3UV31 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.58■□□□□ 0.89
Rnf223Q3UV31 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.58■□□□□ 0.89
Rnf223Q3UV31 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf223Q3UV31 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.58■□□□□ 0.88
Rnf223Q3UV31 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Rnf223Q3UV31 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms