Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cdkl5Q3UTQ8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Cdkl5Q3UTQ8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Cdkl5Q3UTQ8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Cdkl5Q3UTQ8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Gm45444-201ENSMUST00000211394 898 ntBASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdkl5Q3UTQ8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdkl5Q3UTQ8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdkl5Q3UTQ8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.54■■□□□ 1.52
Cdkl5Q3UTQ8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.54■■□□□ 1.52
Cdkl5Q3UTQ8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdkl5Q3UTQ8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cdkl5Q3UTQ8 Gm5921-201ENSMUST00000075898 882 ntBASIC24.53■■□□□ 1.52
Cdkl5Q3UTQ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cdkl5Q3UTQ8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cdkl5Q3UTQ8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdkl5Q3UTQ8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.51■■□□□ 1.51
Cdkl5Q3UTQ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cdkl5Q3UTQ8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkl5Q3UTQ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.48■■□□□ 1.51
Cdkl5Q3UTQ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdkl5Q3UTQ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdkl5Q3UTQ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.48■■□□□ 1.51
Cdkl5Q3UTQ8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cdkl5Q3UTQ8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.46■■□□□ 1.51
Cdkl5Q3UTQ8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Cdkl5Q3UTQ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdkl5Q3UTQ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cdkl5Q3UTQ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.45■■□□□ 1.51
Cdkl5Q3UTQ8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdkl5Q3UTQ8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms