Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.24■□□□□ 0.99
Zfp560Q3URI6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.24■□□□□ 0.99
Zfp560Q3URI6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp560Q3URI6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Zfp560Q3URI6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp560Q3URI6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zfp560Q3URI6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.2■□□□□ 0.98
Zfp560Q3URI6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Zfp560Q3URI6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Zfp560Q3URI6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Zfp560Q3URI6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Zfp560Q3URI6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.19■□□□□ 0.98
Zfp560Q3URI6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zfp560Q3URI6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.18■□□□□ 0.98
Zfp560Q3URI6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zfp560Q3URI6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Zfp560Q3URI6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zfp560Q3URI6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Zfp560Q3URI6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zfp560Q3URI6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zfp560Q3URI6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zfp560Q3URI6 Gm10232-201ENSMUST00000089221 720 ntBASIC21.14■□□□□ 0.97
Zfp560Q3URI6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Zfp560Q3URI6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zfp560Q3URI6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zfp560Q3URI6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zfp560Q3URI6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zfp560Q3URI6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zfp560Q3URI6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms