Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Naf1Q3UMQ8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Naf1Q3UMQ8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.56■■□□□ 1.04
Naf1Q3UMQ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Naf1Q3UMQ8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Naf1Q3UMQ8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Naf1Q3UMQ8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.53■■□□□ 1.04
Naf1Q3UMQ8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.53■■□□□ 1.04
Naf1Q3UMQ8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Naf1Q3UMQ8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.52■■□□□ 1.04
Naf1Q3UMQ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Naf1Q3UMQ8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Naf1Q3UMQ8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Naf1Q3UMQ8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Naf1Q3UMQ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Naf1Q3UMQ8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Naf1Q3UMQ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.49■■□□□ 1.03
Naf1Q3UMQ8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Naf1Q3UMQ8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Naf1Q3UMQ8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Naf1Q3UMQ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.48■■□□□ 1.03
Naf1Q3UMQ8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Naf1Q3UMQ8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Naf1Q3UMQ8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Naf1Q3UMQ8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Naf1Q3UMQ8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Naf1Q3UMQ8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Naf1Q3UMQ8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Naf1Q3UMQ8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Naf1Q3UMQ8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Naf1Q3UMQ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.43■■□□□ 1.02
Naf1Q3UMQ8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Naf1Q3UMQ8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Naf1Q3UMQ8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Naf1Q3UMQ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms