Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Limch1Q3UH68 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Limch1Q3UH68 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Limch1Q3UH68 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Limch1Q3UH68 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.91■■□□□ 1.58
Limch1Q3UH68 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Limch1Q3UH68 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Limch1Q3UH68 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.91■■□□□ 1.58
Limch1Q3UH68 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.91■■□□□ 1.58
Limch1Q3UH68 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Limch1Q3UH68 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Limch1Q3UH68 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Limch1Q3UH68 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Limch1Q3UH68 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.9■■□□□ 1.58
Limch1Q3UH68 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Limch1Q3UH68 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Limch1Q3UH68 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Limch1Q3UH68 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Limch1Q3UH68 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Limch1Q3UH68 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.88■■□□□ 1.57
Limch1Q3UH68 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Limch1Q3UH68 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.88■■□□□ 1.57
Limch1Q3UH68 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Limch1Q3UH68 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.88■■□□□ 1.57
Limch1Q3UH68 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Limch1Q3UH68 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Limch1Q3UH68 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.87■■□□□ 1.57
Limch1Q3UH68 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.87■■□□□ 1.57
Limch1Q3UH68 Gm14117-201ENSMUST00000122417 843 ntBASIC24.87■■□□□ 1.57
Limch1Q3UH68 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.87■■□□□ 1.57
Limch1Q3UH68 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Limch1Q3UH68 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.87■■□□□ 1.57
Limch1Q3UH68 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Limch1Q3UH68 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Limch1Q3UH68 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.86■■□□□ 1.57
Limch1Q3UH68 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Limch1Q3UH68 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.86■■□□□ 1.57
Limch1Q3UH68 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.85■■□□□ 1.57
Limch1Q3UH68 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Limch1Q3UH68 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Limch1Q3UH68 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Limch1Q3UH68 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
Limch1Q3UH68 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Limch1Q3UH68 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.84■■□□□ 1.57
Limch1Q3UH68 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.83■■□□□ 1.57
Limch1Q3UH68 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.83■■□□□ 1.57
Limch1Q3UH68 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Limch1Q3UH68 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Limch1Q3UH68 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Limch1Q3UH68 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Limch1Q3UH68 Gm9959-201ENSMUST00000068277 390 ntBASIC24.82■■□□□ 1.56
Limch1Q3UH68 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Limch1Q3UH68 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Limch1Q3UH68 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Limch1Q3UH68 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Limch1Q3UH68 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.79■■□□□ 1.56
Limch1Q3UH68 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms