Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cln6Q3U466 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.92■□□□□ 0.46
Cln6Q3U466 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cln6Q3U466 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cln6Q3U466 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cln6Q3U466 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cln6Q3U466 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cln6Q3U466 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cln6Q3U466 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cln6Q3U466 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cln6Q3U466 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.91■□□□□ 0.46
Cln6Q3U466 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.91■□□□□ 0.46
Cln6Q3U466 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cln6Q3U466 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.9■□□□□ 0.46
Cln6Q3U466 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cln6Q3U466 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cln6Q3U466 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cln6Q3U466 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Cln6Q3U466 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
Cln6Q3U466 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.89■□□□□ 0.45
Cln6Q3U466 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cln6Q3U466 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cln6Q3U466 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cln6Q3U466 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cln6Q3U466 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cln6Q3U466 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.89■□□□□ 0.45
Cln6Q3U466 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cln6Q3U466 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Cln6Q3U466 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.89■□□□□ 0.45
Cln6Q3U466 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cln6Q3U466 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cln6Q3U466 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.87■□□□□ 0.45
Cln6Q3U466 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cln6Q3U466 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cln6Q3U466 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cln6Q3U466 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cln6Q3U466 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cln6Q3U466 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cln6Q3U466 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cln6Q3U466 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cln6Q3U466 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.85■□□□□ 0.45
Cln6Q3U466 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cln6Q3U466 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cln6Q3U466 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.84■□□□□ 0.45
Cln6Q3U466 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cln6Q3U466 Gm9806-201ENSMUST00000051080 552 ntBASIC17.84■□□□□ 0.45
Cln6Q3U466 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cln6Q3U466 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.83■□□□□ 0.45
Cln6Q3U466 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 1253.5 ms