Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tff1Q08423 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tff1Q08423 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tff1Q08423 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tff1Q08423 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tff1Q08423 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.45■□□□□ 0.38
Tff1Q08423 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tff1Q08423 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.45■□□□□ 0.38
Tff1Q08423 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tff1Q08423 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tff1Q08423 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.44■□□□□ 0.38
Tff1Q08423 Gm15546-201ENSMUST00000122095 826 ntBASIC17.44■□□□□ 0.38
Tff1Q08423 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tff1Q08423 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tff1Q08423 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tff1Q08423 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tff1Q08423 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.43■□□□□ 0.38
Tff1Q08423 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.43■□□□□ 0.38
Tff1Q08423 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.43■□□□□ 0.38
Tff1Q08423 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.43■□□□□ 0.38
Tff1Q08423 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tff1Q08423 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tff1Q08423 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tff1Q08423 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tff1Q08423 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tff1Q08423 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tff1Q08423 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.42■□□□□ 0.38
Tff1Q08423 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tff1Q08423 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.42■□□□□ 0.38
Tff1Q08423 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Tff1Q08423 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Tff1Q08423 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tff1Q08423 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Tff1Q08423 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.41■□□□□ 0.38
Tff1Q08423 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Tff1Q08423 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tff1Q08423 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.4■□□□□ 0.38
Tff1Q08423 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tff1Q08423 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tff1Q08423 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tff1Q08423 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.39■□□□□ 0.38
Tff1Q08423 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.39■□□□□ 0.37
Tff1Q08423 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tff1Q08423 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tff1Q08423 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tff1Q08423 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Tff1Q08423 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.39■□□□□ 0.37
Tff1Q08423 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.39■□□□□ 0.37
Tff1Q08423 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tff1Q08423 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tff1Q08423 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms