Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Xrn1P97789 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Xrn1P97789 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Xrn1P97789 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Xrn1P97789 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Xrn1P97789 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Xrn1P97789 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.2■■■□□ 2.58
Xrn1P97789 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
Xrn1P97789 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
Xrn1P97789 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Xrn1P97789 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
Xrn1P97789 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Xrn1P97789 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Xrn1P97789 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
Xrn1P97789 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC31.17■■■□□ 2.58
Xrn1P97789 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Xrn1P97789 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Xrn1P97789 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Xrn1P97789 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Xrn1P97789 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Xrn1P97789 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Xrn1P97789 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Xrn1P97789 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Xrn1P97789 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Xrn1P97789 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Xrn1P97789 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Xrn1P97789 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Xrn1P97789 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Xrn1P97789 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC31.14■■■□□ 2.58
Xrn1P97789 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Xrn1P97789 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Xrn1P97789 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Xrn1P97789 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Xrn1P97789 Gm43017-201ENSMUST00000198296 752 ntBASIC31.13■■■□□ 2.57
Xrn1P97789 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Xrn1P97789 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Xrn1P97789 Gm6139-201ENSMUST00000079261 882 ntBASIC31.12■■■□□ 2.57
Xrn1P97789 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC31.12■■■□□ 2.57
Xrn1P97789 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Xrn1P97789 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Xrn1P97789 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Xrn1P97789 AC158990.1-201ENSMUST00000221450 2016 ntBASIC31.11■■■□□ 2.57
Xrn1P97789 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Xrn1P97789 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Xrn1P97789 Gm12251-201ENSMUST00000117893 792 ntBASIC31.1■■■□□ 2.57
Xrn1P97789 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Xrn1P97789 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC31.1■■■□□ 2.57
Xrn1P97789 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Xrn1P97789 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Xrn1P97789 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Xrn1P97789 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Xrn1P97789 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC31.09■■■□□ 2.57
Xrn1P97789 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Xrn1P97789 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Xrn1P97789 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Xrn1P97789 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Xrn1P97789 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.08■■■□□ 2.57
Xrn1P97789 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Xrn1P97789 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Xrn1P97789 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Xrn1P97789 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Xrn1P97789 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Xrn1P97789 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Xrn1P97789 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Xrn1P97789 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Xrn1P97789 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC31.05■■■□□ 2.56
Xrn1P97789 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Xrn1P97789 Gm9207-201ENSMUST00000198773 1115 ntBASIC31.05■■■□□ 2.56
Xrn1P97789 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Xrn1P97789 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Xrn1P97789 Gm8495-201ENSMUST00000188740 694 ntBASIC31.04■■■□□ 2.56
Xrn1P97789 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC31.04■■■□□ 2.56
Xrn1P97789 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.04■■■□□ 2.56
Xrn1P97789 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Xrn1P97789 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Xrn1P97789 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Xrn1P97789 Gm43137-201ENSMUST00000198052 594 ntBASIC31.04■■■□□ 2.56
Xrn1P97789 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC31.04■■■□□ 2.56
Xrn1P97789 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Xrn1P97789 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Xrn1P97789 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Xrn1P97789 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Xrn1P97789 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Xrn1P97789 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Xrn1P97789 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Xrn1P97789 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Xrn1P97789 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
Xrn1P97789 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Xrn1P97789 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.56
Xrn1P97789 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Xrn1P97789 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Xrn1P97789 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC31.01■■■□□ 2.55
Xrn1P97789 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.01■■■□□ 2.55
Xrn1P97789 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Xrn1P97789 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Xrn1P97789 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Xrn1P97789 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
Xrn1P97789 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Xrn1P97789 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Xrn1P97789 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 275.7 ms