Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Trim43cP86449 Gm43566-201ENSMUST00000196851 808 ntBASIC23.2■■□□□ 1.3
Trim43cP86449 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim43cP86449 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Trim43cP86449 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.19■■□□□ 1.3
Trim43cP86449 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Trim43cP86449 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim43cP86449 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
Trim43cP86449 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim43cP86449 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim43cP86449 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim43cP86449 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Trim43cP86449 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Trim43cP86449 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim43cP86449 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim43cP86449 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim43cP86449 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim43cP86449 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
Trim43cP86449 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim43cP86449 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim43cP86449 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim43cP86449 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.16■■□□□ 1.3
Trim43cP86449 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Trim43cP86449 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim43cP86449 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim43cP86449 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Trim43cP86449 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.15■■□□□ 1.3
Trim43cP86449 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim43cP86449 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim43cP86449 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim43cP86449 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim43cP86449 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim43cP86449 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim43cP86449 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim43cP86449 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim43cP86449 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim43cP86449 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim43cP86449 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.14■■□□□ 1.29
Trim43cP86449 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim43cP86449 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim43cP86449 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Trim43cP86449 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim43cP86449 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim43cP86449 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim43cP86449 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.1■■□□□ 1.29
Trim43cP86449 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Trim43cP86449 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Trim43cP86449 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.09■■□□□ 1.29
Trim43cP86449 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Trim43cP86449 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.09■■□□□ 1.29
Trim43cP86449 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim43cP86449 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim43cP86449 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Trim43cP86449 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim43cP86449 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim43cP86449 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.09■■□□□ 1.29
Trim43cP86449 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Trim43cP86449 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Trim43cP86449 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Trim43cP86449 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Trim43cP86449 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Trim43cP86449 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim43cP86449 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.08■■□□□ 1.29
Trim43cP86449 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trim43cP86449 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trim43cP86449 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Trim43cP86449 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Trim43cP86449 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim43cP86449 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.06■■□□□ 1.28
Trim43cP86449 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim43cP86449 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.06■■□□□ 1.28
Trim43cP86449 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.06■■□□□ 1.28
Trim43cP86449 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Trim43cP86449 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Trim43cP86449 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.06■■□□□ 1.28
Trim43cP86449 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.06■■□□□ 1.28
Trim43cP86449 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim43cP86449 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Trim43cP86449 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim43cP86449 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim43cP86449 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim43cP86449 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.05■■□□□ 1.28
Trim43cP86449 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Trim43cP86449 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim43cP86449 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim43cP86449 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim43cP86449 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Trim43cP86449 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim43cP86449 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.04■■□□□ 1.28
Trim43cP86449 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms