Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.67■□□□□ 0.42
Gcm1P70348 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Gcm1P70348 Gm14117-201ENSMUST00000122417 843 ntBASIC17.67■□□□□ 0.42
Gcm1P70348 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.67■□□□□ 0.42
Gcm1P70348 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gcm1P70348 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.67■□□□□ 0.42
Gcm1P70348 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gcm1P70348 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Gcm1P70348 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gcm1P70348 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gcm1P70348 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Gcm1P70348 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gcm1P70348 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gcm1P70348 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gcm1P70348 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.66■□□□□ 0.42
Gcm1P70348 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gcm1P70348 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Etf1-202ENSMUST00000180351 108 ntBASIC17.65■□□□□ 0.42
Gcm1P70348 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.65■□□□□ 0.42
Gcm1P70348 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gcm1P70348 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gcm1P70348 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gcm1P70348 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gcm1P70348 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gcm1P70348 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Gcm1P70348 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gcm1P70348 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.63■□□□□ 0.41
Gcm1P70348 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gcm1P70348 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gcm1P70348 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gcm1P70348 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.62■□□□□ 0.41
Gcm1P70348 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.62■□□□□ 0.41
Gcm1P70348 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gcm1P70348 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.61■□□□□ 0.41
Gcm1P70348 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gcm1P70348 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Gcm1P70348 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.61■□□□□ 0.41
Gcm1P70348 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.61■□□□□ 0.41
Gcm1P70348 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gcm1P70348 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.6■□□□□ 0.41
Gcm1P70348 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.6■□□□□ 0.41
Gcm1P70348 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.6■□□□□ 0.41
Gcm1P70348 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gcm1P70348 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gcm1P70348 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gcm1P70348 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gcm1P70348 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gcm1P70348 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gcm1P70348 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.59■□□□□ 0.41
Gcm1P70348 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.59■□□□□ 0.41
Gcm1P70348 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.59■□□□□ 0.41
Gcm1P70348 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gcm1P70348 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gcm1P70348 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Gcm1P70348 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gcm1P70348 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gcm1P70348 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gcm1P70348 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.58■□□□□ 0.4
Gcm1P70348 Gm7417-201ENSMUST00000192950 473 ntBASIC17.58■□□□□ 0.4
Gcm1P70348 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.58■□□□□ 0.4
Gcm1P70348 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gcm1P70348 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gcm1P70348 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gcm1P70348 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gcm1P70348 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gcm1P70348 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gcm1P70348 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.56■□□□□ 0.4
Gcm1P70348 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gcm1P70348 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.56■□□□□ 0.4
Gcm1P70348 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gcm1P70348 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms