Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim4P70271 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pdlim4P70271 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim4P70271 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim4P70271 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Pdlim4P70271 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdlim4P70271 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim4P70271 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim4P70271 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim4P70271 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim4P70271 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.53■□□□□ 0.4
Pdlim4P70271 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim4P70271 Gm43566-201ENSMUST00000196851 808 ntBASIC17.52■□□□□ 0.4
Pdlim4P70271 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim4P70271 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim4P70271 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim4P70271 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim4P70271 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim4P70271 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim4P70271 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim4P70271 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim4P70271 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pdlim4P70271 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim4P70271 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim4P70271 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pdlim4P70271 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pdlim4P70271 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.5■□□□□ 0.39
Pdlim4P70271 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim4P70271 Notumos-201ENSMUST00000151998 2659 ntBASIC17.5■□□□□ 0.39
Pdlim4P70271 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim4P70271 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim4P70271 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Gm13238-201ENSMUST00000117655 780 ntBASIC17.49■□□□□ 0.39
Pdlim4P70271 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pdlim4P70271 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim4P70271 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.48■□□□□ 0.39
Pdlim4P70271 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdlim4P70271 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.48■□□□□ 0.39
Pdlim4P70271 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pdlim4P70271 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim4P70271 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pdlim4P70271 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim4P70271 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.47■□□□□ 0.39
Pdlim4P70271 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.47■□□□□ 0.39
Pdlim4P70271 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.47■□□□□ 0.39
Pdlim4P70271 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.47■□□□□ 0.39
Pdlim4P70271 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim4P70271 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim4P70271 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim4P70271 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim4P70271 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim4P70271 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.46■□□□□ 0.39
Pdlim4P70271 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.46■□□□□ 0.39
Pdlim4P70271 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pdlim4P70271 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim4P70271 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim4P70271 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pdlim4P70271 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdlim4P70271 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.45■□□□□ 0.38
Pdlim4P70271 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.45■□□□□ 0.38
Pdlim4P70271 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim4P70271 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms