Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl39P62892 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl39P62892 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Rpl39P62892 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpl39P62892 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.05■□□□□ -0
Rpl39P62892 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpl39P62892 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpl39P62892 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpl39P62892 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpl39P62892 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpl39P62892 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rpl39P62892 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpl39P62892 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpl39P62892 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpl39P62892 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rpl39P62892 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rpl39P62892 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpl39P62892 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpl39P62892 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpl39P62892 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpl39P62892 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpl39P62892 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpl39P62892 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.02■□□□□ -0
Rpl39P62892 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpl39P62892 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpl39P62892 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpl39P62892 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpl39P62892 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rpl39P62892 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Gm45364-201ENSMUST00000210883 159 ntBASIC15.01□□□□□ -0.01
Rpl39P62892 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rpl39P62892 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpl39P62892 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15□□□□□ -0.01
Rpl39P62892 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rpl39P62892 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15□□□□□ -0.01
Rpl39P62892 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Rpl39P62892 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpl39P62892 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Rpl39P62892 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpl39P62892 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpl39P62892 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rpl39P62892 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpl39P62892 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rpl39P62892 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpl39P62892 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.99□□□□□ -0.01
Rpl39P62892 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpl39P62892 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpl39P62892 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.98□□□□□ -0.01
Rpl39P62892 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpl39P62892 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.98□□□□□ -0.01
Rpl39P62892 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpl39P62892 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpl39P62892 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rpl39P62892 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpl39P62892 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpl39P62892 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpl39P62892 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpl39P62892 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rpl39P62892 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.95□□□□□ -0.02
Rpl39P62892 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rpl39P62892 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpl39P62892 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms