Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cks1bP61025 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.88□□□□□ -0.03
Cks1bP61025 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1bP61025 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cks1bP61025 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cks1bP61025 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.87□□□□□ -0.03
Cks1bP61025 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.87□□□□□ -0.03
Cks1bP61025 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1bP61025 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Cks1bP61025 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cks1bP61025 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.86□□□□□ -0.03
Cks1bP61025 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cks1bP61025 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.86□□□□□ -0.03
Cks1bP61025 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.86□□□□□ -0.03
Cks1bP61025 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1bP61025 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.85□□□□□ -0.03
Cks1bP61025 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1bP61025 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cks1bP61025 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.84□□□□□ -0.03
Cks1bP61025 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.84□□□□□ -0.03
Cks1bP61025 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.84□□□□□ -0.03
Cks1bP61025 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.84□□□□□ -0.03
Cks1bP61025 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1bP61025 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cks1bP61025 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks1bP61025 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks1bP61025 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cks1bP61025 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1bP61025 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1bP61025 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1bP61025 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1bP61025 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1bP61025 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cks1bP61025 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms