Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.34■■□□□ 1.97
Msh6P54276 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Msh6P54276 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Msh6P54276 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Msh6P54276 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Msh6P54276 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Msh6P54276 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.32■■□□□ 1.96
Msh6P54276 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Msh6P54276 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Msh6P54276 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC27.32■■□□□ 1.96
Msh6P54276 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC27.32■■□□□ 1.96
Msh6P54276 Golgb1-201ENSMUST00000023534 498 ntBASIC27.32■■□□□ 1.96
Msh6P54276 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Msh6P54276 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Msh6P54276 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Msh6P54276 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Msh6P54276 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Msh6P54276 Gm45417-201ENSMUST00000209533 758 ntBASIC27.31■■□□□ 1.96
Msh6P54276 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Msh6P54276 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Msh6P54276 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
Msh6P54276 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC27.31■■□□□ 1.96
Msh6P54276 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Msh6P54276 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Msh6P54276 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.3■■□□□ 1.96
Msh6P54276 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Msh6P54276 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Msh6P54276 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Msh6P54276 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
Msh6P54276 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27.29■■□□□ 1.96
Msh6P54276 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC27.29■■□□□ 1.96
Msh6P54276 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC27.29■■□□□ 1.96
Msh6P54276 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Msh6P54276 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Msh6P54276 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Msh6P54276 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Msh6P54276 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC27.27■■□□□ 1.96
Msh6P54276 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Msh6P54276 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Msh6P54276 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Msh6P54276 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC27.25■■□□□ 1.95
Msh6P54276 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC27.25■■□□□ 1.95
Msh6P54276 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC27.25■■□□□ 1.95
Msh6P54276 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Msh6P54276 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Msh6P54276 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Msh6P54276 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Msh6P54276 AC115037.1-201ENSMUST00000223391 2173 ntBASIC27.24■■□□□ 1.95
Msh6P54276 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Msh6P54276 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC27.23■■□□□ 1.95
Msh6P54276 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Msh6P54276 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
Msh6P54276 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Msh6P54276 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Msh6P54276 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Msh6P54276 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Msh6P54276 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC27.22■■□□□ 1.95
Msh6P54276 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Msh6P54276 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Msh6P54276 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Msh6P54276 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Msh6P54276 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Msh6P54276 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Msh6P54276 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Msh6P54276 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Msh6P54276 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Msh6P54276 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Msh6P54276 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Msh6P54276 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Msh6P54276 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Msh6P54276 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Msh6P54276 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Msh6P54276 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Msh6P54276 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Msh6P54276 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Msh6P54276 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Msh6P54276 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Msh6P54276 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Msh6P54276 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Msh6P54276 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Msh6P54276 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Msh6P54276 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Msh6P54276 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Msh6P54276 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms