Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atxn1P54254 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atxn1P54254 Gm10399-202ENSMUST00000202768 748 ntBASIC20.99■□□□□ 0.95
Atxn1P54254 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.99■□□□□ 0.95
Atxn1P54254 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Atxn1P54254 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.99■□□□□ 0.95
Atxn1P54254 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atxn1P54254 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atxn1P54254 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atxn1P54254 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atxn1P54254 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Atxn1P54254 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.98■□□□□ 0.95
Atxn1P54254 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.98■□□□□ 0.95
Atxn1P54254 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.97■□□□□ 0.95
Atxn1P54254 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atxn1P54254 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Atxn1P54254 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Atxn1P54254 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Atxn1P54254 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atxn1P54254 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atxn1P54254 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Atxn1P54254 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.96■□□□□ 0.95
Atxn1P54254 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atxn1P54254 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atxn1P54254 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atxn1P54254 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atxn1P54254 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.95■□□□□ 0.94
Atxn1P54254 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atxn1P54254 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.95■□□□□ 0.94
Atxn1P54254 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atxn1P54254 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Atxn1P54254 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Atxn1P54254 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atxn1P54254 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atxn1P54254 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atxn1P54254 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atxn1P54254 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atxn1P54254 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.93■□□□□ 0.94
Atxn1P54254 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atxn1P54254 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Atxn1P54254 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atxn1P54254 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atxn1P54254 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atxn1P54254 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atxn1P54254 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atxn1P54254 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atxn1P54254 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atxn1P54254 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atxn1P54254 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Atxn1P54254 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atxn1P54254 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.9■□□□□ 0.94
Atxn1P54254 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.9■□□□□ 0.94
Atxn1P54254 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.9■□□□□ 0.94
Atxn1P54254 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atxn1P54254 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Atxn1P54254 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atxn1P54254 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atxn1P54254 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.89■□□□□ 0.93
Atxn1P54254 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.89■□□□□ 0.93
Atxn1P54254 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Atxn1P54254 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Atxn1P54254 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atxn1P54254 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Atxn1P54254 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atxn1P54254 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms