Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmga2P52927 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Hmga2P52927 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmga2P52927 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmga2P52927 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Hmga2P52927 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.04■□□□□ 0.48
Hmga2P52927 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmga2P52927 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hmga2P52927 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmga2P52927 Gm7432-201ENSMUST00000210343 879 ntBASIC18.02■□□□□ 0.48
Hmga2P52927 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmga2P52927 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hmga2P52927 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmga2P52927 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmga2P52927 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18■□□□□ 0.47
Hmga2P52927 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18■□□□□ 0.47
Hmga2P52927 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hmga2P52927 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmga2P52927 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.99■□□□□ 0.47
Hmga2P52927 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.99■□□□□ 0.47
Hmga2P52927 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmga2P52927 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmga2P52927 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hmga2P52927 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmga2P52927 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmga2P52927 Gm11599-201ENSMUST00000118720 878 ntBASIC17.98■□□□□ 0.47
Hmga2P52927 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hmga2P52927 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmga2P52927 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmga2P52927 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Hmga2P52927 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hmga2P52927 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmga2P52927 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmga2P52927 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.96■□□□□ 0.47
Hmga2P52927 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmga2P52927 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmga2P52927 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmga2P52927 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmga2P52927 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.95■□□□□ 0.46
Hmga2P52927 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hmga2P52927 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga2P52927 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.95■□□□□ 0.46
Hmga2P52927 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hmga2P52927 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga2P52927 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hmga2P52927 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.93■□□□□ 0.46
Hmga2P52927 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hmga2P52927 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga2P52927 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga2P52927 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga2P52927 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.92■□□□□ 0.46
Hmga2P52927 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Hmga2P52927 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.92■□□□□ 0.46
Hmga2P52927 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmga2P52927 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga2P52927 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.92■□□□□ 0.46
Hmga2P52927 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga2P52927 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga2P52927 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hmga2P52927 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hmga2P52927 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms