Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.36■□□□□ 0.85
Sox18P43680 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox18P43680 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.35■□□□□ 0.85
Sox18P43680 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.35■□□□□ 0.85
Sox18P43680 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox18P43680 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox18P43680 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.34■□□□□ 0.85
Sox18P43680 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox18P43680 Gm5874-201ENSMUST00000096101 508 ntBASIC20.34■□□□□ 0.85
Sox18P43680 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox18P43680 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.34■□□□□ 0.85
Sox18P43680 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox18P43680 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox18P43680 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.33■□□□□ 0.85
Sox18P43680 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Sox18P43680 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sox18P43680 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox18P43680 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Sox18P43680 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sox18P43680 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox18P43680 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox18P43680 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox18P43680 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sox18P43680 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox18P43680 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox18P43680 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox18P43680 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox18P43680 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox18P43680 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox18P43680 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox18P43680 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.29■□□□□ 0.84
Sox18P43680 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Sox18P43680 Gm43017-201ENSMUST00000198296 752 ntBASIC20.29■□□□□ 0.84
Sox18P43680 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.29■□□□□ 0.84
Sox18P43680 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox18P43680 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox18P43680 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.29■□□□□ 0.84
Sox18P43680 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sox18P43680 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox18P43680 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox18P43680 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox18P43680 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox18P43680 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox18P43680 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sox18P43680 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox18P43680 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox18P43680 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox18P43680 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Sox18P43680 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox18P43680 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Sox18P43680 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox18P43680 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox18P43680 Gm7291-201ENSMUST00000199147 382 ntBASIC20.26■□□□□ 0.83
Sox18P43680 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox18P43680 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox18P43680 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sox18P43680 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sox18P43680 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sox18P43680 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sox18P43680 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Sox18P43680 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sox18P43680 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox18P43680 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
Sox18P43680 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sox18P43680 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.24■□□□□ 0.83
Sox18P43680 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.24■□□□□ 0.83
Sox18P43680 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox18P43680 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms