Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxa2P35583 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa2P35583 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa2P35583 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.81■□□□□ 0.44
Foxa2P35583 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.81■□□□□ 0.44
Foxa2P35583 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa2P35583 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa2P35583 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxa2P35583 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa2P35583 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa2P35583 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.8■□□□□ 0.44
Foxa2P35583 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa2P35583 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa2P35583 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxa2P35583 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Foxa2P35583 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.8■□□□□ 0.44
Foxa2P35583 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Foxa2P35583 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxa2P35583 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Foxa2P35583 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxa2P35583 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Foxa2P35583 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Foxa2P35583 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxa2P35583 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxa2P35583 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxa2P35583 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.77■□□□□ 0.43
Foxa2P35583 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxa2P35583 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.76■□□□□ 0.43
Foxa2P35583 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Foxa2P35583 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxa2P35583 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxa2P35583 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxa2P35583 Gm10420-201ENSMUST00000121713 882 ntBASIC17.75■□□□□ 0.43
Foxa2P35583 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxa2P35583 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxa2P35583 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Foxa2P35583 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.74■□□□□ 0.43
Foxa2P35583 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.74■□□□□ 0.43
Foxa2P35583 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Foxa2P35583 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxa2P35583 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.73■□□□□ 0.43
Foxa2P35583 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxa2P35583 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxa2P35583 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.73■□□□□ 0.43
Foxa2P35583 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Foxa2P35583 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxa2P35583 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxa2P35583 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.72■□□□□ 0.43
Foxa2P35583 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxa2P35583 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Foxa2P35583 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Foxa2P35583 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Foxa2P35583 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Foxa2P35583 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxa2P35583 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxa2P35583 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxa2P35583 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Foxa2P35583 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxa2P35583 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxa2P35583 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxa2P35583 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms