Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf1bP25119 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnfrsf1bP25119 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf1bP25119 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1bP25119 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1bP25119 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1bP25119 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1bP25119 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf1bP25119 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1bP25119 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf1bP25119 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Tnfrsf1bP25119 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf1bP25119 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.73
Tnfrsf1bP25119 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.58■□□□□ 0.72
Tnfrsf1bP25119 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf1bP25119 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf1bP25119 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Tnfrsf1bP25119 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf1bP25119 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf1bP25119 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Tnfrsf1bP25119 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Tnfrsf1bP25119 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.56■□□□□ 0.72
Tnfrsf1bP25119 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf1bP25119 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1bP25119 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf1bP25119 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1bP25119 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf1bP25119 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf1bP25119 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1bP25119 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf1bP25119 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1bP25119 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1bP25119 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1bP25119 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf1bP25119 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf1bP25119 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.49■□□□□ 0.71
Tnfrsf1bP25119 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms