Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp6P0C0A3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chmp6P0C0A3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Chmp6P0C0A3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp6P0C0A3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp6P0C0A3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp6P0C0A3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chmp6P0C0A3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.94■■□□□ 1.26
Chmp6P0C0A3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp6P0C0A3 Gm43566-201ENSMUST00000196851 808 ntBASIC22.93■■□□□ 1.26
Chmp6P0C0A3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chmp6P0C0A3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.93■■□□□ 1.26
Chmp6P0C0A3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp6P0C0A3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.92■■□□□ 1.26
Chmp6P0C0A3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.92■■□□□ 1.26
Chmp6P0C0A3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp6P0C0A3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp6P0C0A3 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.92■■□□□ 1.26
Chmp6P0C0A3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Chmp6P0C0A3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chmp6P0C0A3 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp6P0C0A3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chmp6P0C0A3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp6P0C0A3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp6P0C0A3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp6P0C0A3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.89■■□□□ 1.25
Chmp6P0C0A3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp6P0C0A3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp6P0C0A3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp6P0C0A3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp6P0C0A3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Chmp6P0C0A3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Gm5812-201ENSMUST00000061073 957 ntBASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp6P0C0A3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.84■■□□□ 1.25
Chmp6P0C0A3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Chmp6P0C0A3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.83■■□□□ 1.25
Chmp6P0C0A3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.83■■□□□ 1.25
Chmp6P0C0A3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Chmp6P0C0A3 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.82■■□□□ 1.24
Chmp6P0C0A3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp6P0C0A3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp6P0C0A3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Chmp6P0C0A3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp6P0C0A3 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.82■■□□□ 1.24
Chmp6P0C0A3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms