Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a2P08122 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a2P08122 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.15■□□□□ 0.82
Col4a2P08122 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
Col4a2P08122 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a2P08122 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a2P08122 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a2P08122 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a2P08122 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.14■□□□□ 0.81
Col4a2P08122 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a2P08122 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.14■□□□□ 0.81
Col4a2P08122 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a2P08122 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a2P08122 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Col4a2P08122 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a2P08122 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.13■□□□□ 0.81
Col4a2P08122 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.13■□□□□ 0.81
Col4a2P08122 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Col4a2P08122 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a2P08122 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a2P08122 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a2P08122 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.12■□□□□ 0.81
Col4a2P08122 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Col4a2P08122 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a2P08122 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a2P08122 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col4a2P08122 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.11■□□□□ 0.81
Col4a2P08122 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a2P08122 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Col4a2P08122 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.1■□□□□ 0.81
Col4a2P08122 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a2P08122 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a2P08122 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a2P08122 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a2P08122 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.08■□□□□ 0.81
Col4a2P08122 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a2P08122 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.08■□□□□ 0.8
Col4a2P08122 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Col4a2P08122 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a2P08122 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a2P08122 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a2P08122 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a2P08122 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
Col4a2P08122 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Col4a2P08122 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a2P08122 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a2P08122 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col4a2P08122 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.05■□□□□ 0.8
Col4a2P08122 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
Col4a2P08122 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col4a2P08122 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.04■□□□□ 0.8
Col4a2P08122 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a2P08122 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col4a2P08122 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Col4a2P08122 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
Col4a2P08122 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a2P08122 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a2P08122 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms