Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa4P06798 Gm42418-201ENSMUST00000182010 1831 ntBASIC21■□□□□ 0.95
Hoxa4P06798 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21■□□□□ 0.95
Hoxa4P06798 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21■□□□□ 0.95
Hoxa4P06798 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21■□□□□ 0.95
Hoxa4P06798 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21■□□□□ 0.95
Hoxa4P06798 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxa4P06798 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxa4P06798 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxa4P06798 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxa4P06798 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.99■□□□□ 0.95
Hoxa4P06798 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxa4P06798 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.98■□□□□ 0.95
Hoxa4P06798 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.98■□□□□ 0.95
Hoxa4P06798 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa4P06798 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa4P06798 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa4P06798 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa4P06798 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa4P06798 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hoxa4P06798 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa4P06798 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.96■□□□□ 0.95
Hoxa4P06798 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa4P06798 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hoxa4P06798 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa4P06798 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa4P06798 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.96■□□□□ 0.95
Hoxa4P06798 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.96■□□□□ 0.95
Hoxa4P06798 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa4P06798 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hoxa4P06798 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa4P06798 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa4P06798 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Hoxa4P06798 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa4P06798 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa4P06798 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa4P06798 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Hoxa4P06798 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa4P06798 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hoxa4P06798 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hoxa4P06798 Gm45102-201ENSMUST00000207427 857 ntBASIC20.93■□□□□ 0.94
Hoxa4P06798 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.93■□□□□ 0.94
Hoxa4P06798 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa4P06798 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.93■□□□□ 0.94
Hoxa4P06798 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa4P06798 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.93■□□□□ 0.94
Hoxa4P06798 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hoxa4P06798 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa4P06798 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa4P06798 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa4P06798 Gm40881-201ENSMUST00000223397 166 ntBASIC20.92■□□□□ 0.94
Hoxa4P06798 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa4P06798 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa4P06798 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hoxa4P06798 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.91■□□□□ 0.94
Hoxa4P06798 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa4P06798 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa4P06798 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hoxa4P06798 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hoxa4P06798 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa4P06798 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa4P06798 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa4P06798 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.9■□□□□ 0.94
Hoxa4P06798 Gm9959-201ENSMUST00000068277 390 ntBASIC20.9■□□□□ 0.94
Hoxa4P06798 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxa4P06798 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.9■□□□□ 0.94
Hoxa4P06798 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa4P06798 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxa4P06798 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Hoxa4P06798 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.89■□□□□ 0.93
Hoxa4P06798 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa4P06798 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxa4P06798 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hoxa4P06798 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.87■□□□□ 0.93
Hoxa4P06798 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa4P06798 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa4P06798 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa4P06798 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.86■□□□□ 0.93
Hoxa4P06798 Rps24-207ENSMUST00000224568 714 ntBASIC20.86■□□□□ 0.93
Hoxa4P06798 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa4P06798 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 681.5 ms