Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.41■□□□□ 0.54
P04224 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.41■□□□□ 0.54
P04224 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04224 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04224 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
P04224 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
P04224 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P04224 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
P04224 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.39■□□□□ 0.54
P04224 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
P04224 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04224 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
P04224 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
P04224 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
P04224 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04224 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04224 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.39■□□□□ 0.53
P04224 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04224 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04224 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04224 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
P04224 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
P04224 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.37■□□□□ 0.53
P04224 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
P04224 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04224 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04224 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.36■□□□□ 0.53
P04224 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.36■□□□□ 0.53
P04224 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.36■□□□□ 0.53
P04224 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04224 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
P04224 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04224 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04224 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04224 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04224 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.35■□□□□ 0.53
P04224 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.35■□□□□ 0.53
P04224 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
P04224 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P04224 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04224 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.34■□□□□ 0.53
P04224 Gm9812-201ENSMUST00000061934 968 ntBASIC18.34■□□□□ 0.53
P04224 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04224 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P04224 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04224 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.33■□□□□ 0.53
P04224 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P04224 Mir3960-201ENSMUST00000198213 73 ntBASIC18.33■□□□□ 0.52
P04224 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04224 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
P04224 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
P04224 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04224 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04224 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
P04224 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
P04224 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.32■□□□□ 0.52
P04224 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04224 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04224 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.32■□□□□ 0.52
P04224 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
P04224 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.31■□□□□ 0.52
P04224 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.31■□□□□ 0.52
P04224 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
P04224 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04224 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.3■□□□□ 0.52
P04224 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
P04224 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
P04224 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.3■□□□□ 0.52
P04224 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04224 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms