Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P04212 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04212 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P04212 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
P04212 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.1■□□□□ 0.33
P04212 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04212 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P04212 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04212 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P04212 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04212 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P04212 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.09■□□□□ 0.33
P04212 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
P04212 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04212 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.09■□□□□ 0.33
P04212 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04212 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
P04212 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
P04212 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04212 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04212 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04212 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04212 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04212 Gm27502-201ENSMUST00000183495 199 ntBASIC17.08■□□□□ 0.32
P04212 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P04212 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.08■□□□□ 0.32
P04212 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04212 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.08■□□□□ 0.32
P04212 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P04212 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04212 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04212 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
P04212 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04212 Gm11175-201ENSMUST00000116172 543 ntBASIC17.07■□□□□ 0.32
P04212 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04212 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04212 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
P04212 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04212 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04212 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04212 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.06■□□□□ 0.32
P04212 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04212 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04212 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04212 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04212 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.05■□□□□ 0.32
P04212 Gm14523-201ENSMUST00000117260 558 ntBASIC17.05■□□□□ 0.32
P04212 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.05■□□□□ 0.32
P04212 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.05■□□□□ 0.32
P04212 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P04212 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04212 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
P04212 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P04212 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.04■□□□□ 0.32
P04212 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.04■□□□□ 0.32
P04212 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.04■□□□□ 0.32
P04212 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04212 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P04212 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
P04212 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04212 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04212 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04212 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04212 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04212 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.02■□□□□ 0.32
P04212 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04212 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
P04212 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.02■□□□□ 0.31
P04212 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04212 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.01■□□□□ 0.31
P04212 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P04212 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04212 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P04212 Gm10616-201ENSMUST00000205285 2127 ntBASIC17■□□□□ 0.31
P04212 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P04212 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04212 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04212 Gm7332-201ENSMUST00000118351 454 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms