Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt1P04104 Gm45855-201ENSMUST00000212546 880 ntBASIC19.97■□□□□ 0.79
Krt1P04104 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt1P04104 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt1P04104 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.97■□□□□ 0.79
Krt1P04104 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Krt1P04104 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Krt1P04104 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt1P04104 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Krt1P04104 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Krt1P04104 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Krt1P04104 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.95■□□□□ 0.78
Krt1P04104 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Krt1P04104 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Krt1P04104 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.94■□□□□ 0.78
Krt1P04104 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.94■□□□□ 0.78
Krt1P04104 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.94■□□□□ 0.78
Krt1P04104 Nkain2-201ENSMUST00000092602 558 ntBASIC19.94■□□□□ 0.78
Krt1P04104 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Krt1P04104 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.93■□□□□ 0.78
Krt1P04104 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Krt1P04104 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Krt1P04104 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Krt1P04104 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt1P04104 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Krt1P04104 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt1P04104 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt1P04104 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Krt1P04104 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Krt1P04104 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Krt1P04104 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Krt1P04104 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt1P04104 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt1P04104 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt1P04104 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt1P04104 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.9■□□□□ 0.78
Krt1P04104 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt1P04104 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
Krt1P04104 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Krt1P04104 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt1P04104 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt1P04104 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt1P04104 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Krt1P04104 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Krt1P04104 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt1P04104 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt1P04104 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.89■□□□□ 0.77
Krt1P04104 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.89■□□□□ 0.77
Krt1P04104 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.89■□□□□ 0.77
Krt1P04104 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt1P04104 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Krt1P04104 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt1P04104 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.88■□□□□ 0.77
Krt1P04104 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Krt1P04104 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Krt1P04104 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Krt1P04104 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Krt1P04104 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.87■□□□□ 0.77
Krt1P04104 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt1P04104 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Krt1P04104 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.86■□□□□ 0.77
Krt1P04104 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt1P04104 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms