Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn1O88704 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.12■□□□□ 0.81
Hcn1O88704 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.12■□□□□ 0.81
Hcn1O88704 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn1O88704 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
Hcn1O88704 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Hcn1O88704 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn1O88704 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn1O88704 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.1■□□□□ 0.81
Hcn1O88704 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn1O88704 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hcn1O88704 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.1■□□□□ 0.81
Hcn1O88704 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn1O88704 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn1O88704 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.1■□□□□ 0.81
Hcn1O88704 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn1O88704 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.09■□□□□ 0.81
Hcn1O88704 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.09■□□□□ 0.81
Hcn1O88704 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn1O88704 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hcn1O88704 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn1O88704 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcn1O88704 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Hcn1O88704 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcn1O88704 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcn1O88704 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.08■□□□□ 0.81
Hcn1O88704 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.08■□□□□ 0.8
Hcn1O88704 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hcn1O88704 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcn1O88704 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn1O88704 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Hcn1O88704 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hcn1O88704 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.07■□□□□ 0.8
Hcn1O88704 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn1O88704 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn1O88704 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn1O88704 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn1O88704 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.07■□□□□ 0.8
Hcn1O88704 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hcn1O88704 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.06■□□□□ 0.8
Hcn1O88704 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.06■□□□□ 0.8
Hcn1O88704 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.06■□□□□ 0.8
Hcn1O88704 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn1O88704 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Hcn1O88704 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.05■□□□□ 0.8
Hcn1O88704 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hcn1O88704 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn1O88704 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn1O88704 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Hcn1O88704 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn1O88704 Gm45444-201ENSMUST00000211394 898 ntBASIC20.04■□□□□ 0.8
Hcn1O88704 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn1O88704 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn1O88704 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hcn1O88704 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hcn1O88704 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hcn1O88704 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn1O88704 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hcn1O88704 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Hcn1O88704 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hcn1O88704 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hcn1O88704 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hcn1O88704 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Hcn1O88704 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hcn1O88704 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn1O88704 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcn1O88704 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcn1O88704 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms