Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Psmc3O88685 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Psmc3O88685 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Psmc3O88685 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Psmc3O88685 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Psmc3O88685 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Psmc3O88685 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Psmc3O88685 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Psmc3O88685 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.37■■□□□ 1.17
Psmc3O88685 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Psmc3O88685 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.36■■□□□ 1.17
Psmc3O88685 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Psmc3O88685 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Psmc3O88685 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Psmc3O88685 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.35■■□□□ 1.17
Psmc3O88685 Gm27454-201ENSMUST00000185090 204 ntBASIC22.35■■□□□ 1.17
Psmc3O88685 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
Psmc3O88685 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Psmc3O88685 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Psmc3O88685 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Psmc3O88685 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Psmc3O88685 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Psmc3O88685 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Psmc3O88685 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Psmc3O88685 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Psmc3O88685 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.33■■□□□ 1.17
Psmc3O88685 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Psmc3O88685 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
Psmc3O88685 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Psmc3O88685 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Psmc3O88685 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Psmc3O88685 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Psmc3O88685 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Psmc3O88685 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Psmc3O88685 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.32■■□□□ 1.16
Psmc3O88685 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.32■■□□□ 1.16
Psmc3O88685 Golgb1-201ENSMUST00000023534 498 ntBASIC22.32■■□□□ 1.16
Psmc3O88685 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Psmc3O88685 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Psmc3O88685 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.31■■□□□ 1.16
Psmc3O88685 Gm45417-201ENSMUST00000209533 758 ntBASIC22.31■■□□□ 1.16
Psmc3O88685 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Psmc3O88685 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Psmc3O88685 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.3■■□□□ 1.16
Psmc3O88685 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.3■■□□□ 1.16
Psmc3O88685 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Psmc3O88685 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Psmc3O88685 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Psmc3O88685 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Psmc3O88685 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Psmc3O88685 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Psmc3O88685 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.29■■□□□ 1.16
Psmc3O88685 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.29■■□□□ 1.16
Psmc3O88685 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Psmc3O88685 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Psmc3O88685 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.28■■□□□ 1.16
Psmc3O88685 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.28■■□□□ 1.16
Psmc3O88685 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
Psmc3O88685 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Psmc3O88685 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Psmc3O88685 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Psmc3O88685 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Psmc3O88685 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Psmc3O88685 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
Psmc3O88685 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Psmc3O88685 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Psmc3O88685 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Psmc3O88685 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Psmc3O88685 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Psmc3O88685 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.24■■□□□ 1.15
Psmc3O88685 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Psmc3O88685 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Psmc3O88685 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.23■■□□□ 1.15
Psmc3O88685 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Psmc3O88685 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.23■■□□□ 1.15
Psmc3O88685 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Psmc3O88685 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms