Protein–RNA interactions for Protein: O88507

Cntfr, Ciliary neurotrophic factor receptor subunit alpha, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfrO88507 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CntfrO88507 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CntfrO88507 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CntfrO88507 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CntfrO88507 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CntfrO88507 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.14■□□□□ 0.33
CntfrO88507 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CntfrO88507 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CntfrO88507 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CntfrO88507 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.13■□□□□ 0.33
CntfrO88507 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.13■□□□□ 0.33
CntfrO88507 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.13■□□□□ 0.33
CntfrO88507 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CntfrO88507 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CntfrO88507 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.12■□□□□ 0.33
CntfrO88507 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.12■□□□□ 0.33
CntfrO88507 Rps24-207ENSMUST00000224568 714 ntBASIC17.12■□□□□ 0.33
CntfrO88507 Gm9959-201ENSMUST00000068277 390 ntBASIC17.12■□□□□ 0.33
CntfrO88507 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.12■□□□□ 0.33
CntfrO88507 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.12■□□□□ 0.33
CntfrO88507 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CntfrO88507 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.11■□□□□ 0.33
CntfrO88507 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.11■□□□□ 0.33
CntfrO88507 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CntfrO88507 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CntfrO88507 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CntfrO88507 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.1■□□□□ 0.33
CntfrO88507 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CntfrO88507 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
CntfrO88507 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.1■□□□□ 0.33
CntfrO88507 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.1■□□□□ 0.33
CntfrO88507 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.1■□□□□ 0.33
CntfrO88507 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.1■□□□□ 0.33
CntfrO88507 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CntfrO88507 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CntfrO88507 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.1■□□□□ 0.33
CntfrO88507 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CntfrO88507 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CntfrO88507 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CntfrO88507 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CntfrO88507 Gm14117-201ENSMUST00000122417 843 ntBASIC17.09■□□□□ 0.33
CntfrO88507 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.09■□□□□ 0.33
CntfrO88507 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CntfrO88507 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CntfrO88507 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CntfrO88507 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CntfrO88507 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CntfrO88507 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CntfrO88507 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.08■□□□□ 0.33
CntfrO88507 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CntfrO88507 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CntfrO88507 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CntfrO88507 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CntfrO88507 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CntfrO88507 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CntfrO88507 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CntfrO88507 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.07■□□□□ 0.32
CntfrO88507 Gm45102-201ENSMUST00000207427 857 ntBASIC17.07■□□□□ 0.32
CntfrO88507 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.07■□□□□ 0.32
CntfrO88507 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.07■□□□□ 0.32
CntfrO88507 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CntfrO88507 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CntfrO88507 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CntfrO88507 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.07■□□□□ 0.32
CntfrO88507 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.07■□□□□ 0.32
CntfrO88507 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CntfrO88507 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CntfrO88507 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CntfrO88507 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CntfrO88507 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CntfrO88507 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CntfrO88507 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CntfrO88507 Etf1-202ENSMUST00000180351 108 ntBASIC17.06■□□□□ 0.32
CntfrO88507 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.06■□□□□ 0.32
CntfrO88507 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.06■□□□□ 0.32
CntfrO88507 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CntfrO88507 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CntfrO88507 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CntfrO88507 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CntfrO88507 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CntfrO88507 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.05■□□□□ 0.32
CntfrO88507 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms