Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.17■□□□□ 0.66
Pdlim3O70209 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim3O70209 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim3O70209 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim3O70209 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim3O70209 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.15■□□□□ 0.66
Pdlim3O70209 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.15■□□□□ 0.66
Pdlim3O70209 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pdlim3O70209 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.14■□□□□ 0.66
Pdlim3O70209 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pdlim3O70209 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pdlim3O70209 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim3O70209 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.13■□□□□ 0.65
Pdlim3O70209 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim3O70209 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pdlim3O70209 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim3O70209 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.11■□□□□ 0.65
Pdlim3O70209 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.11■□□□□ 0.65
Pdlim3O70209 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim3O70209 Notumos-201ENSMUST00000151998 2659 ntBASIC19.1■□□□□ 0.65
Pdlim3O70209 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.1■□□□□ 0.65
Pdlim3O70209 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.1■□□□□ 0.65
Pdlim3O70209 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pdlim3O70209 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim3O70209 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim3O70209 Gm6311-201ENSMUST00000073790 878 ntBASIC19.09■□□□□ 0.65
Pdlim3O70209 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim3O70209 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.09■□□□□ 0.65
Pdlim3O70209 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim3O70209 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim3O70209 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim3O70209 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pdlim3O70209 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pdlim3O70209 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim3O70209 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim3O70209 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Pdlim3O70209 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim3O70209 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim3O70209 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim3O70209 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.05■□□□□ 0.64
Pdlim3O70209 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim3O70209 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Pdlim3O70209 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
Pdlim3O70209 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim3O70209 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.05■□□□□ 0.64
Pdlim3O70209 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms