Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf13O54965 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf13O54965 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf13O54965 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf13O54965 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rnf13O54965 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rnf13O54965 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf13O54965 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf13O54965 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rnf13O54965 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf13O54965 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rnf13O54965 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf13O54965 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf13O54965 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf13O54965 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Rnf13O54965 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf13O54965 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf13O54965 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf13O54965 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf13O54965 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf13O54965 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Rnf13O54965 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf13O54965 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rnf13O54965 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf13O54965 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.1■□□□□ 0.65
Rnf13O54965 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf13O54965 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf13O54965 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
Rnf13O54965 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.1■□□□□ 0.65
Rnf13O54965 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf13O54965 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf13O54965 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf13O54965 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.09■□□□□ 0.65
Rnf13O54965 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Rnf13O54965 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.09■□□□□ 0.65
Rnf13O54965 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf13O54965 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf13O54965 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf13O54965 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rnf13O54965 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rnf13O54965 Scarna2-201ENSMUST00000157560 414 ntBASIC19.08■□□□□ 0.64
Rnf13O54965 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.08■□□□□ 0.64
Rnf13O54965 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Rnf13O54965 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf13O54965 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rnf13O54965 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf13O54965 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf13O54965 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.07■□□□□ 0.64
Rnf13O54965 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf13O54965 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf13O54965 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf13O54965 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf13O54965 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf13O54965 Gm9806-201ENSMUST00000051080 552 ntBASIC19.06■□□□□ 0.64
Rnf13O54965 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rnf13O54965 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rnf13O54965 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf13O54965 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf13O54965 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.05■□□□□ 0.64
Rnf13O54965 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf13O54965 Gm16437-201ENSMUST00000025669 507 ntBASIC19.05■□□□□ 0.64
Rnf13O54965 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf13O54965 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf13O54965 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf13O54965 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rnf13O54965 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.04■□□□□ 0.64
Rnf13O54965 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Rnf13O54965 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.04■□□□□ 0.64
Rnf13O54965 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf13O54965 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf13O54965 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf13O54965 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf13O54965 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf13O54965 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf13O54965 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf13O54965 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms