Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.53■■□□□ 1.04
Banf1O54962 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Banf1O54962 Gm11175-201ENSMUST00000116172 543 ntBASIC21.53■■□□□ 1.04
Banf1O54962 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Banf1O54962 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Banf1O54962 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Banf1O54962 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Banf1O54962 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Banf1O54962 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Banf1O54962 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
Banf1O54962 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Banf1O54962 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Banf1O54962 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Banf1O54962 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Banf1O54962 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Banf1O54962 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.5■■□□□ 1.03
Banf1O54962 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Banf1O54962 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Banf1O54962 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Banf1O54962 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Banf1O54962 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.49■■□□□ 1.03
Banf1O54962 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.49■■□□□ 1.03
Banf1O54962 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Banf1O54962 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Banf1O54962 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.48■■□□□ 1.03
Banf1O54962 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Banf1O54962 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Banf1O54962 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.47■■□□□ 1.03
Banf1O54962 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.47■■□□□ 1.03
Banf1O54962 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Banf1O54962 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Banf1O54962 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.46■■□□□ 1.03
Banf1O54962 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Banf1O54962 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Banf1O54962 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.46■■□□□ 1.03
Banf1O54962 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Banf1O54962 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.46■■□□□ 1.03
Banf1O54962 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Banf1O54962 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Banf1O54962 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Banf1O54962 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Banf1O54962 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Banf1O54962 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Banf1O54962 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Banf1O54962 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Banf1O54962 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Banf1O54962 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Banf1O54962 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.45■■□□□ 1.02
Banf1O54962 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.44■■□□□ 1.02
Banf1O54962 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Banf1O54962 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Banf1O54962 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Banf1O54962 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Banf1O54962 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.44■■□□□ 1.02
Banf1O54962 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Banf1O54962 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.43■■□□□ 1.02
Banf1O54962 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Banf1O54962 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 Gm14523-201ENSMUST00000117260 558 ntBASIC21.42■■□□□ 1.02
Banf1O54962 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.42■■□□□ 1.02
Banf1O54962 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Banf1O54962 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.42■■□□□ 1.02
Banf1O54962 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Banf1O54962 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Banf1O54962 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Banf1O54962 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.42■■□□□ 1.02
Banf1O54962 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Banf1O54962 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Banf1O54962 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Banf1O54962 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.4■■□□□ 1.02
Banf1O54962 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Banf1O54962 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms