Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Matn3O35701 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Matn3O35701 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.17■□□□□ 0.66
Matn3O35701 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Matn3O35701 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.16■□□□□ 0.66
Matn3O35701 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Matn3O35701 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Matn3O35701 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Matn3O35701 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Matn3O35701 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Matn3O35701 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Matn3O35701 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.15■□□□□ 0.66
Matn3O35701 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Matn3O35701 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Matn3O35701 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.15■□□□□ 0.66
Matn3O35701 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.14■□□□□ 0.66
Matn3O35701 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Matn3O35701 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Matn3O35701 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Matn3O35701 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.13■□□□□ 0.65
Matn3O35701 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Matn3O35701 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Matn3O35701 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Matn3O35701 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Matn3O35701 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Matn3O35701 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Matn3O35701 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Matn3O35701 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Matn3O35701 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Matn3O35701 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Matn3O35701 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.11■□□□□ 0.65
Matn3O35701 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Matn3O35701 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.11■□□□□ 0.65
Matn3O35701 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Matn3O35701 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Matn3O35701 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.1■□□□□ 0.65
Matn3O35701 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Matn3O35701 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Matn3O35701 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Matn3O35701 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Matn3O35701 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Matn3O35701 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Matn3O35701 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Matn3O35701 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Matn3O35701 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Matn3O35701 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
Matn3O35701 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Matn3O35701 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Matn3O35701 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Matn3O35701 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Matn3O35701 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.08■□□□□ 0.64
Matn3O35701 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Matn3O35701 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Matn3O35701 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Matn3O35701 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Matn3O35701 Gm11599-201ENSMUST00000118720 878 ntBASIC19.07■□□□□ 0.64
Matn3O35701 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Matn3O35701 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Matn3O35701 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Matn3O35701 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Matn3O35701 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.06■□□□□ 0.64
Matn3O35701 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Matn3O35701 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.05■□□□□ 0.64
Matn3O35701 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Matn3O35701 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms